Repeat sequences for mouse: 669 11.7 0.9 2.7 MUSXPDG1 1 111 (32484) C MMB2 SINE (100) 109 1 311 6.3 2.1 0.0 MUSXPDG1 1286 1333 (31262) C ID6 SINE (35) 49 1 * 498 7.1 1.4 0.0 MUSXPDG1 1304 1373 (31222) C ID6 SINE (0) 84 14 222 20.4 3.7 0.0 MUSXPDG1 1529 1582 (31013) C MMFLAM SINE (53) 61 6 269 24.6 0.0 0.0 MUSXPDG1 2297 2357 (30238) + MIR SINE/MIR 80 140 (122) 1007 6.0 1.5 0.0 MUSXPDG1 2568 2701 (29894) + MMB1 SINE 9 144 (2) 188 24.1 5.6 6.5 MUSXPDG1 2728 2835 (29760) + MIR SINE/MIR 93 199 (63) 336 19.7 1.4 0.0 MUSXPDG1 3008 3078 (29517) + MIR SINE/MIR 79 150 (112) 262 15.9 14.5 1.4 MUSXPDG1 3123 3191 (29404) + ID4 SINE 2 79 (0) 335 22.9 0.0 9.3 MUSXPDG1 4325 4442 (28153) + MIR SINE/MIR 58 164 (98) 393 29.8 0.0 0.0 MUSXPDG1 4532 4655 (27940) C MTF LTR/MaLR (113) 264 141 447 23.6 8.1 2.3 MUSXPDG1 4727 4900 (27695) C ORR1B-INT LTR/MaLR (687) 792 609 * 723 12.1 3.2 2.4 MUSXPDG1 4744 4867 (27728) C MMB1 SINE (21) 125 1 423 18.4 0.9 9.7 MUSXPDG1 4966 5079 (27516) C MMB2 SINE (84) 125 22 212 22.4 0.0 2.0 MUSXPDG1 5082 5130 (27465) C MTF LTR/MaLR (329) 48 1 1164 12.9 8.0 1.3 MUSXPDG1 5169 5393 (27202) + URR1 Other 9 248 (3) 321 25.0 1.0 3.0 MUSXPDG1 5379 5478 (27117) C MMB1 SINE (48) 98 1 * 375 19.4 1.4 0.0 MUSXPDG1 6921 6992 (25603) + ID5 SINE 10 82 (1) 503 4.9 0.0 0.0 MUSXPDG1 7132 7192 (25403) C (CA)n Simple_repeat (78) 62 2 453 23.3 2.8 8.9 MUSXPDG1 7219 7398 (25197) + MMB2 SINE 9 177 (32) 607 17.8 13.2 0.0 MUSXPDG1 7415 7543 (25052) C MMB1 SINE (0) 146 1 591 16.3 10.1 1.6 MUSXPDG1 7593 7721 (24874) + MMB1 SINE 1 140 (6) 261 16.4 0.0 5.5 MUSXPDG1 8228 8282 (24313) + MMFLAM SINE 22 73 (41) 234 28.0 15.1 0.0 MUSXPDG1 9173 9265 (23330) C MMFLAM SINE (4) 110 4 766 11.1 16.9 4.1 MUSXPDG1 9313 9484 (23111) C MMB2 SINE (15) 194 1 580 16.7 0.0 2.8 MUSXPDG1 9801 9908 (22687) + MMB1 SINE 1 105 (41) 943 10.2 0.0 3.4 MUSXPDG1 10170 10316 (22279) C MMB2 SINE (67) 142 1 1378 6.6 2.5 1.0 MUSXPDG1 10328 10525 (22070) C MMB2 SINE (8) 201 1 284 23.1 1.9 10.6 MUSXPDG1 10526 10629 (21966) + MMB2 SINE 26 120 (89) 1276 8.8 5.7 0.5 MUSXPDG1 10735 10928 (21667) + MMB2 SINE 1 204 (5) 1147 5.5 0.0 0.0 MUSXPDG1 10928 11072 (21523) + MMB1 SINE 1 145 (1) 208 10.7 0.0 0.0 MUSXPDG1 11076 11103 (21492) + (GAAA)n Simple_repeat 2 29 (107) 214 29.3 10.7 2.9 MUSXPDG1 11104 11243 (21352) + ORR1B-INT LTR/MaLR 605 755 (724) * 408 23.6 8.6 5.7 MUSXPDG1 11142 11281 (21314) + MMB1 SINE 1 144 (2) 1162 9.4 7.2 0.0 MUSXPDG1 11291 11471 (21124) + MMB2 SINE 15 208 (1) 828 6.5 0.0 0.0 MUSXPDG1 12008 12115 (20480) + MMB1 SINE 38 145 (1) 25 16.3 0.0 0.0 MUSXPDG1 12550 12684 (19911) C GC_rich Low_complexity (75) 135 1 359 22.7 0.0 4.5 MUSXPDG1 12879 12988 (19607) + MMFLAM SINE 8 112 (2) 260 20.2 1.3 6.3 MUSXPDG1 13002 13080 (19515) + ID4 SINE 3 77 (2) 268 28.9 2.6 3.5 MUSXPDG1 13107 13220 (19375) + MMB1 SINE 18 130 (16) 665 14.9 19.9 4.4 MUSXPDG1 13296 13476 (19119) C MMB2 SINE (0) 209 1 660 21.4 0.0 2.1 MUSXPDG1 13481 13620 (18975) C MMB1F SINE (1) 144 8 215 30.7 2.3 2.3 MUSXPDG1 14084 14171 (18424) + MMB1 SINE 20 107 (39) 263 25.8 7.5 0.0 MUSXPDG1 15357 15449 (17146) C MMSQR2 Other (449) 183 84 261 25.6 1.2 4.9 MUSXPDG1 15497 15578 (17017) C ID2 SINE (0) 79 1 842 13.3 0.7 3.3 MUSXPDG1 15765 15914 (16681) + MMB1 SINE 1 146 (0) 381 28.7 1.9 0.0 MUSXPDG1 16427 16534 (16061) C MMFLAM SINE (1) 113 4 1115 6.9 0.0 0.0 MUSXPDG1 18169 18313 (14282) C MMB1 SINE (1) 145 1 244 17.8 0.0 0.0 MUSXPDG1 19991 20035 (12560) + (CAA)n Simple_repeat 1 45 (93) 1061 5.8 0.0 5.2 MUSXPDG1 23081 23234 (9361) + MMB1 SINE 1 146 (0) 204 12.5 0.0 0.0 MUSXPDG1 26731 26762 (5833) + (GGA)n Simple_repeat 1 32 (106) 243 14.6 1.8 5.5 MUSXPDG1 26763 26817 (5778) C (GGGA)n Simple_repeat (80) 56 4 264 19.7 17.9 8.6 MUSXPDG1 27860 27976 (4619) C MMB1 SINE (18) 128 1 329 17.1 0.0 4.3 MUSXPDG1 27993 28062 (4533) C MMFLAM SINE (5) 109 43 225 26.5 0.0 4.8 MUSXPDG1 28009 28091 (4504) C MMB1 SINE (51) 95 17 * 225 19.3 1.8 1.8 MUSXPDG1 28719 28775 (3820) + ID6 SINE 28 84 (0) * 584 3.9 0.0 0.0 MUSXPDG1 28752 28828 (3767) + ID6 SINE 8 84 (0) * 655 2.4 0.0 0.0 MUSXPDG1 28798 28881 (3714) + ID6 SINE 1 84 (0) 477 3.2 0.0 0.0 MUSXPDG1 28851 28913 (3682) + ID6 SINE 1 63 (21) * 212 10.5 2.6 0.0 MUSXPDG1 28915 28952 (3643) C ID6 SINE (45) 39 1 213 3.9 0.0 0.0 MUSXPDG1 29146 29171 (3424) + (CA)n Simple_repeat 2 27 (113) 29 81.1 0.0 0.0 MUSXPDG1 30303 30482 (2113) C AT_rich Low_complexity (30) 180 1 214 6.5 3.2 0.0 MUSXPDG1 30304 30334 (2261) C (GGAA)n Simple_repeat (103) 33 2 412 21.9 0.0 3.1 MUSXPDG1 30336 30431 (2164) C MMFLAM SINE (1) 113 21 239 26.2 3.3 0.0 MUSXPDG1 30887 30947 (1648) + MMFLAM SINE 3 65 (49) 409 19.7 11.1 4.3 MUSXPDG1 30988 31104 (1491) + MMB2 SINE 1 125 (84) 584 18.6 8.5 0.0 MUSXPDG1 31195 31312 (1283) + MMB1 SINE 9 136 (10) 772 9.5 0.0 1.7 MUSXPDG1 31517 31632 (963) C MMB1F SINE (0) 145 32 560 15.5 0.0 2.1 MUSXPDG1 31952 32048 (547) + MMB1 SINE 4 98 (48) 369 0.0 0.0 0.0 MUSXPDG1 32064 32104 (491) + (TAAAA)n Simple_repeat 1 41 (97) 1277 9.4 0.6 0.0 MUSXPDG1 32151 32331 (264) + MMB2 SINE 1 182 (27) unique seqs = 1