Repeat sequences for human: 615 18.2 0.8 0.8 HUMXPDG1 1 121 (54215) C AluJo SINE/Alu (105) 197 77 1931 12.8 0.3 1.3 HUMXPDG1 303 607 (53729) C AluSx SINE/Alu (0) 302 1 2171 7.7 1.0 0.0 HUMXPDG1 640 937 (53399) + AluY SINE/Alu 1 301 (0) 1871 13.9 0.3 0.0 HUMXPDG1 1209 1503 (52833) C AluJb SINE/Alu (6) 296 1 2060 11.1 0.0 1.6 HUMXPDG1 1555 1860 (52476) + AluSx SINE/Alu 1 301 (1) 1739 14.7 1.3 0.7 HUMXPDG1 3621 3919 (50417) C AluSx SINE/Alu (1) 301 1 1798 11.8 1.3 4.8 HUMXPDG1 3939 4251 (50085) C AluSx SINE/Alu (0) 302 1 766 12.5 0.8 2.3 HUMXPDG1 4287 4414 (49922) + AluJo SINE/Alu 177 302 (0) 2034 10.5 0.0 1.3 HUMXPDG1 4426 4730 (49606) + AluSx SINE/Alu 2 302 (0) 2140 8.7 1.7 0.0 HUMXPDG1 4896 5193 (49143) + AluSq SINE/Alu 1 303 (0) 2409 4.3 0.0 0.0 HUMXPDG1 5197 5497 (48839) + AluY SINE/Alu 1 301 (0) 207 11.4 2.3 4.5 HUMXPDG1 6193 6236 (48100) C (TAAAA)n Simple_repeat (94) 44 2 1718 10.2 5.8 3.4 HUMXPDG1 6239 6531 (47805) C AluSx SINE/Alu (2) 300 1 1765 14.7 0.0 2.9 HUMXPDG1 6534 6840 (47496) C AluSx SINE/Alu (3) 299 2 1714 11.7 0.0 2.6 HUMXPDG1 7129 7401 (46935) + AluSq SINE/Alu 1 266 (37) 343 6.7 6.7 0.0 HUMXPDG1 7408 7467 (46869) + (TA)n Simple_repeat 1 64 (76) 1895 12.5 0.0 0.7 HUMXPDG1 7660 7954 (46382) C AluSx SINE/Alu (9) 293 1 1935 10.8 2.7 0.3 HUMXPDG1 8959 9253 (45083) C AluSq SINE/Alu (1) 302 1 1924 13.0 0.3 0.3 HUMXPDG1 9465 9764 (44572) + AluSq SINE/Alu 1 300 (3) 214 20.4 0.0 0.0 HUMXPDG1 9771 9819 (44517) + AluJo SINE/Alu 251 299 (3) 2018 12.0 0.3 0.0 HUMXPDG1 9824 10123 (44213) + AluSx SINE/Alu 2 302 (0) 2115 10.3 0.0 0.0 HUMXPDG1 10129 10428 (43908) + AluSq SINE/Alu 2 301 (2) 822 21.2 0.6 0.0 HUMXPDG1 10431 10590 (43746) + AluJo SINE/Alu 129 289 (13) 291 10.3 5.2 1.7 HUMXPDG1 10593 10650 (43686) C (TAAA)n Simple_repeat (76) 60 1 2039 9.6 0.0 1.0 HUMXPDG1 10651 10951 (43385) C AluSg SINE/Alu (1) 299 2 430 21.4 7.1 7.7 HUMXPDG1 10958 11139 (43197) + MLT1D LTR/MaLR. 172 352 (153) 1179 15.6 2.9 6.2 HUMXPDG1 11257 11499 (42837) C AluJb SINE/Alu (67) 235 1 2062 9.3 0.0 3.5 HUMXPDG1 11734 12045 (42291) + AluSq SINE/Alu 1 301 (2) 1800 15.8 0.0 0.7 HUMXPDG1 12147 12450 (41886) + AluJb SINE/Alu 1 302 (0) 389 12.5 0.0 0.0 HUMXPDG1 12504 12559 (41777) C (GA)n Simple_repeat (83) 57 2 1964 11.9 2.0 0.0 HUMXPDG1 12560 12852 (41484) C AluSx SINE/Alu (0) 302 4 2038 11.1 0.0 0.3 HUMXPDG1 12866 13162 (41174) C AluSp SINE/Alu (7) 296 1 550 9.7 0.0 0.0 HUMXPDG1 13258 13329 (41007) C (CA)n Simple_repeat (67) 73 2 1984 12.6 0.0 0.0 HUMXPDG1 13382 13675 (40661) C AluSx SINE/Alu (8) 294 1 619 15.0 6.7 0.8 HUMXPDG1 13962 14081 (40255) + AluJo SINE/Alu 1 127 (175) 21 3.7 0.0 0.0 HUMXPDG1 14113 14139 (40197) C AT_rich Low_complexity (183) 27 1 1614 15.3 1.4 1.7 HUMXPDG1 14140 14427 (39909) + AluJo SINE/Alu 2 288 (14) 1843 15.2 0.0 0.3 HUMXPDG1 14432 14733 (39603) + AluSx SINE/Alu 2 302 (0) 1840 12.2 2.0 2.6 HUMXPDG1 15071 15372 (38964) C AluSg SINE/Alu (0) 300 1 313 11.6 0.0 0.0 HUMXPDG1 15433 15475 (38861) + (CA)n Simple_repeat 2 44 (96) 1697 16.5 0.0 0.3 HUMXPDG1 15476 15760 (38576) C AluJb SINE/Alu (17) 285 2 1684 15.8 0.7 2.0 HUMXPDG1 15804 16100 (38236) + AluJb SINE/Alu 1 293 (9) 241 34.2 0.0 0.0 HUMXPDG1 16104 16214 (38122) + MIR2 LINE/L2 35 145 (1) 2075 10.3 0.3 0.0 HUMXPDG1 16246 16545 (37791) C AluSp SINE/Alu (2) 301 1 340 12.1 0.0 14.3 HUMXPDG1 16631 16721 (37615) C FLAM_C SINE/Alu (0) 133 56 * 348 16.4 0.0 3.0 HUMXPDG1 16655 16721 (37615) C AluJo SINE/Alu (182) 120 56 1956 12.0 1.3 0.0 HUMXPDG1 17617 17915 (36421) + AluSq SINE/Alu 1 303 (0) 204 31.7 2.0 0.0 HUMXPDG1 17916 18016 (36320) C MIR SINE/MIR (24) 238 136 1143 11.7 0.0 0.6 HUMXPDG1 18036 18206 (36130) C AluSx SINE/Alu (131) 171 2 364 29.7 0.0 0.0 HUMXPDG1 18208 18308 (36028) C MIR SINE/MIR (113) 149 49 425 30.4 6.3 1.1 HUMXPDG1 19219 19409 (34927) + MIR SINE/MIR 59 259 (3) 1619 13.0 9.4 0.7 HUMXPDG1 19419 19695 (34641) + AluSx SINE/Alu 1 301 (1) 1972 8.5 3.1 1.4 HUMXPDG1 19780 20072 (34264) + AluSp SINE/Alu 1 298 (5) 252 18.4 0.0 0.0 HUMXPDG1 20078 20126 (34210) C MIR SINE/MIR (25) 237 189 506 27.1 0.9 0.0 HUMXPDG1 20131 20237 (34099) + (TA)n Simple_repeat 2 109 (31) 1999 11.4 0.7 0.0 HUMXPDG1 20238 20535 (33801) C AluSg SINE/Alu (0) 300 1 1539 11.3 0.0 0.4 HUMXPDG1 20539 20767 (33569) C AluSq SINE/Alu (2) 301 74 2163 7.5 0.7 0.0 HUMXPDG1 21151 21442 (32894) + AluSp SINE/Alu 1 294 (9) 1686 14.7 1.4 0.7 HUMXPDG1 21457 21742 (32594) + AluJo SINE/Alu 1 288 (14) 1171 11.6 0.0 0.0 HUMXPDG1 21789 21961 (32375) C AluSg SINE/Alu (7) 293 121 2099 8.8 1.4 0.0 HUMXPDG1 21962 22257 (32079) C AluSg SINE/Alu (0) 300 1 349 22.8 2.1 9.0 HUMXPDG1 22803 22947 (31389) C (CAGA)n Simple_repeat (1) 135 1 232 30.8 1.9 1.9 HUMXPDG1 24458 24561 (29775) + MIR SINE/MIR 89 192 (70) 255 30.6 3.3 1.6 HUMXPDG1 24655 24775 (29561) C MIR SINE/MIR (115) 147 25 1813 13.5 3.8 0.0 HUMXPDG1 25369 25657 (28679) + AluSg SINE/Alu 1 300 (0) 2181 8.8 0.0 0.0 HUMXPDG1 26447 26741 (27595) C AluSc SINE/Alu (4) 295 1 893 15.0 0.0 0.0 HUMXPDG1 26775 26914 (27422) + AluSx SINE/Alu 2 141 (161) 2025 12.2 0.0 0.0 HUMXPDG1 26915 27210 (27126) + AluSx SINE/Alu 1 296 (6) 2333 4.9 0.0 1.0 HUMXPDG1 27211 27514 (26822) + AluY SINE/Alu 1 301 (0) 2028 10.8 0.7 0.3 HUMXPDG1 27518 27813 (26523) + AluSx SINE/Alu 1 297 (5) 209 29.6 13.9 0.0 HUMXPDG1 28647 28754 (25582) C MIR2 LINE/L2 (0) 146 24 1318 15.2 12.7 3.3 HUMXPDG1 29273 29548 (24788) + AluSx SINE/Alu 1 302 (0) 416 24.4 2.3 3.8 HUMXPDG1 30496 30626 (23710) + MIR SINE/MIR 117 245 (17) 1929 11.8 1.0 0.3 HUMXPDG1 30768 31064 (23272) C AluSx SINE/Alu (3) 299 1 352 24.3 8.7 0.0 HUMXPDG1 31483 31585 (22751) + MIR SINE/MIR 40 151 (111) 804 13.9 0.0 2.9 HUMXPDG1 31638 31774 (22562) + FLAM_C SINE/Alu 1 133 (0) 2109 8.7 0.3 0.0 HUMXPDG1 32229 32517 (21819) C AluSq SINE/Alu (13) 290 1 218 38.2 0.6 1.2 HUMXPDG1 33624 33788 (20548) C L1 LINE/L1 (294) 5096 4933 872 11.9 0.0 0.8 HUMXPDG1 37319 37452 (16884) C FLAM_C SINE/Alu (0) 133 1 304 31.6 12.0 0.0 HUMXPDG1 37591 37748 (16588) + MIR SINE/MIR 80 256 (6) 21 3.9 0.0 0.0 HUMXPDG1 37870 37895 (16441) C GC_rich Low_complexity (184) 26 1 2215 7.0 1.0 0.0 HUMXPDG1 40232 40531 (13805) C AluSp SINE/Alu (0) 303 1 1680 11.5 2.3 0.0 HUMXPDG1 41415 41674 (12662) C AluSx SINE/Alu (2) 300 35 1960 12.4 0.0 1.6 HUMXPDG1 43074 43379 (10957) + AluSx SINE/Alu 1 301 (1) 309 20.8 0.0 1.4 HUMXPDG1 43384 43455 (10881) + (CA)n Simple_repeat 2 72 (68) 1519 13.1 6.5 3.1 HUMXPDG1 43461 43750 (10586) + AluJb SINE/Alu 1 300 (2) 1995 9.8 0.3 0.3 HUMXPDG1 43960 44245 (10091) + AluSq SINE/Alu 3 288 (15) 2004 9.8 0.3 2.3 HUMXPDG1 44809 45114 (9222) C AluSq SINE/Alu (3) 300 1 21 85.0 0.0 0.0 HUMXPDG1 45119 45291 (9045) C AT_rich Low_complexity (37) 173 1 892 13.7 2.0 0.7 HUMXPDG1 45143 45288 (9048) C AluJo SINE/Alu (154) 148 1 213 28.9 2.2 1.1 HUMXPDG1 45766 45855 (8481) C (TGAG)n Simple_repeat (45) 91 1 * 321 16.7 0.0 0.0 HUMXPDG1 45790 45843 (8493) + (CA)n Simple_repeat 2 55 (85) 433 27.5 0.0 1.4 HUMXPDG1 46282 46419 (7917) + (CA)n Simple_repeat 1 136 (4) 27 15.2 0.0 0.0 HUMXPDG1 46812 46923 (7413) C GC_rich Low_complexity (98) 112 1 2044 10.8 0.0 0.0 HUMXPDG1 47295 47589 (6747) C AluSx SINE/Alu (7) 295 1 467 16.1 1.1 2.1 HUMXPDG1 47685 47777 (6559) + MIR SINE/MIR 50 141 (121) 2023 9.0 2.3 1.7 HUMXPDG1 47835 48134 (6202) C AluSx SINE/Alu (0) 302 1 295 21.9 15.8 0.0 HUMXPDG1 48219 48332 (6004) + MIR2 LINE/L2 15 146 (0) 2122 8.3 0.3 0.0 HUMXPDG1 48396 48685 (5651) + AluSq SINE/Alu 6 296 (7) 244 24.5 6.5 10.8 HUMXPDG1 48969 49107 (5229) + MIR2 LINE/L2 10 142 (4) 1901 10.9 1.7 0.7 HUMXPDG1 49151 49443 (4893) C AluSq SINE/Alu (7) 296 1 1496 15.6 1.7 3.1 HUMXPDG1 49453 49741 (4595) C AluJo SINE/Alu (12) 290 6 1812 11.5 0.0 7.1 HUMXPDG1 49795 50117 (4219) + AluSq SINE/Alu 3 302 (1) 1703 10.1 0.0 0.0 HUMXPDG1 50126 50363 (3973) C AluSx SINE/Alu (34) 268 31 493 28.4 5.8 1.8 HUMXPDG1 50483 50707 (3629) + MIR SINE/MIR 21 254 (8) 428 27.5 3.8 2.5 HUMXPDG1 50735 50894 (3442) + MIR SINE/MIR 35 196 (66) 2021 11.0 0.3 0.0 HUMXPDG1 50955 51253 (3083) C AluY SINE/Alu (1) 300 1 474 28.2 13.0 0.0 HUMXPDG1 51306 51482 (2854) C MIR SINE/MIR (0) 262 63 213 24.0 2.0 0.0 HUMXPDG1 51501 51550 (2786) C MIR SINE/MIR (90) 172 122 534 18.8 11.6 0.0 HUMXPDG1 51551 51662 (2674) + AluJo SINE/Alu 1 125 (177) 1899 12.1 2.4 0.7 HUMXPDG1 51666 51962 (2374) C AluSx SINE/Alu (0) 302 1 1946 10.9 0.0 0.7 HUMXPDG1 51965 52249 (2087) C AluSx SINE/Alu (9) 293 11 952 17.2 1.1 2.1 HUMXPDG1 52252 52437 (1899) + AluJo SINE/Alu 116 299 (3) 180 17.6 0.0 0.0 HUMXPDG1 52438 52471 (1865) C MIR SINE/MIR (134) 128 95 26 83.8 0.0 0.0 HUMXPDG1 52573 52732 (1604) C AT_rich Low_complexity (50) 160 1 977 7.8 0.0 0.0 HUMXPDG1 52598 52726 (1610) + AluSq SINE/Alu 1 129 (174) 2158 5.5 4.2 0.0 HUMXPDG1 52733 53021 (1315) + AluY SINE/Alu 1 301 (0) 1213 9.1 0.0 0.6 HUMXPDG1 53032 53206 (1130) + AluSg SINE/Alu 127 300 (0) 1380 14.8 3.6 7.3 HUMXPDG1 53725 54027 (309) + AluJo SINE/Alu 1 292 (10) 256 15.4 0.0 7.7 HUMXPDG1 54035 54099 (237) + (TAAAA)n Simple_repeat 2 61 (77) 1808 7.2 0.0 0.0 HUMXPDG1 54100 54336 (0) + AluSq SINE/Alu 1 237 (66) unique seqs = 1