# Runs of best total count for hs3: 

RUN DENOMINATION:

The encoding of a run contains the name of the method (agree, kkno,
kunk, phylogen, infocon, etc), the region on which the test was
performed (hs2, hs3, beta = HBB promoter, hs23b = combined hs2-hs3-HBB
promoter), parameter values (or ranges) for the particular test.

Example:

phylogen.hs2.l9.N.a1.286:1.333

denotes a phylogen run on the hs2 region. The minimum region length was
9, the fixed anchor value varied in the range [1.286,1.333] and no
flexible anchor was used.

+ ------------------------------------------------------------------------- +

DIRECTORY CONTENTS:

kkno.hs3.l9.graph 
kunk.hs3.l9.graph
infocon.hs3.l7.a1.191.graph 
phylogen.hs3.N.l5.a0.300.graph
phylogen.hs3.A.l5.a-4.700.graph  # identical to phylogen.hs3.N.l5.a0.300.graph
agree.hs3.X.l4.p100.graph
agree.hs3.G.l4.p100.graph

Note:
 * First line is a comment indicating the range of parameters used and 
   the actual fp, fn and total counts.
 * The first (and only) column contains the positions in the human 
   sequence reported by our programs. 

# Table of infocon results for the "best" runs (for hs3):

infocon.hs3.l7.graph

Note: 
 * Line format: <anchor_value> <total>