# Runs of best total count for hs2: 


RUN DENOMINATION:

The encoding of a run contains the name of the method (agree, kkno,
kunk, phylogen, infocon, etc), the region on which the test was
performed (hs2, hs3, beta = HBB promoter, hs23b = combined hs2-hs3-HBB
promoter), parameter values (or ranges) for the particular test.

Example:

phylogen.hs2.l9.N.a1.286:1.333

denotes a phylogen run on the hs2 region. The minimum region length was
9, the fixed anchor value varied in the range [1.286,1.333] and no
flexible anchor was used.


+ ------------------------------------------------------------------------- +

DIRECTORY CONTENTS:

kkno.hs2.l5.graph
kunk.hs2.l7.graph
infocon.hs2.l6.graph
phylogen.hs2.N.l9.a1.300.graph
phylogen.hs2.A.l9.a-3.700.graph  # identical to phylogen.hs2.N.l9.a1.300.graph 
agree.hs2.X.l13.p60.graph
agree.hs2.G.l16.p60.graph

Note:

 * First line is a comment indicating the range of parameters used and 
   the actual fp, fn and total counts.
 * The first (and only) column contains the positions in the human 
   sequence reported by our programs. 


# Table of infocon results for the "best" runs (for hs2):

infocon.hs2.l6.graph

Note: 
 * Line format: <anchor_value> <total>