SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 648 6.8 0.0 3.4 sequence 1 88 (19912) + LTR12C LTR/ERV1 1069 1153 (425) 1 244 29.6 0.0 0.0 sequence 89 159 (19841) + LTR30 LTR/ERV1 544 614 (108) 2 1360 15.5 5.5 0.0 sequence 162 380 (19620) + LTR12 LTR/ERV1 351 581 (133) 3 516 12.2 9.9 6.8 sequence 381 515 (19485) + L1MC1 LINE/L1 6204 6344 (0) 4 2390 13.5 9.7 0.5 sequence 569 960 (19040) + MSTA LTR/MaLR 1 428 (0) 8 9189 18.0 3.0 0.2 sequence 962 2553 (17447) + MSTA-int LTR/MaLR 2 1637 (14) 8 2697 11.8 8.0 0.5 sequence 2568 2965 (17035) + MSTA LTR/MaLR 1 428 (0) 8 428 27.3 5.0 0.0 sequence 3189 3287 (16713) + MER94 DNA/AcHobo 3 106 (28) 9 638 23.5 13.2 0.0 sequence 3615 3750 (16250) C AluJo SINE/Alu (37) 275 122 10 5133 15.6 9.6 0.6 sequence 3775 4756 (15244) + L1MC3 LINE/L1 6701 7770 (15) 11 2372 9.7 0.3 0.0 sequence 4796 5106 (14894) + AluSx SINE/Alu 1 312 (0) 12 1965 15.7 0.0 1.0 sequence 5501 5800 (14200) C AluSx SINE/Alu (9) 303 7 13 298 28.7 7.9 0.0 sequence 6387 6487 (13513) C L1M4 LINE/L1 (1297) 4849 4741 14 23 0.0 0.0 0.0 sequence 6813 6835 (13165) + AT_rich Low_complexity 1 23 (0) 15 243 22.9 1.0 3.5 sequence 6957 7059 (12941) C L1MB4 LINE/L1 (25) 6159 6059 16 21 0.0 0.0 0.0 sequence 7070 7090 (12910) + AT_rich Low_complexity 1 21 (0) 18 188 33.0 6.4 3.2 sequence 7524 7617 (12383) C L2 LINE/L2 (33) 3280 3184 19 263 24.7 3.2 2.1 sequence 7645 7737 (12263) C MLT1J LTR/MaLR (4) 507 414 20 246 12.3 1.5 6.2 sequence 8197 8261 (11739) + (TATATG)n Simple_repeat 3 64 (0) 21 2907 14.0 3.6 1.7 sequence 8263 8621 (11379) + L1MA9 LINE/L1 5783 6157 (155) 22 342 6.7 0.0 0.0 sequence 8622 8666 (11334) + (CA)n Simple_repeat 1 45 (0) 23 2907 14.0 3.6 1.7 sequence 8667 8826 (11174) + L1MA9 LINE/L1 6157 6312 (0) 22 1901 10.5 0.0 12.5 sequence 9146 9497 (10503) + AluSq SINE/Alu 1 308 (5) 24 2634 5.8 0.0 0.3 sequence 9859 10170 (9830) + AluY SINE/Alu 1 311 (0) 25 405 29.4 10.4 4.0 sequence 11313 11513 (8487) C MIR SINE/MIR (36) 226 13 26 239 25.9 24.7 0.0 sequence 11632 11716 (8284) + L2 LINE/L2 3165 3270 (2) 27 1574 21.5 13.1 1.6 sequence 12134 12640 (7360) + L1ME3B LINE/L1 5267 5842 (398) 30 478 21.3 11.0 7.0 sequence 12672 12900 (7100) + L1ME3B LINE/L1 5910 6213 (27) 30 1338 8.6 0.0 0.0 sequence 13171 13333 (6667) + AluY SINE/Alu 2 164 (147) 32 2467 6.8 0.0 0.7 sequence 13543 13851 (6149) C AluY SINE/Alu (4) 307 1 33 1832 12.8 2.3 3.6 sequence 13905 14208 (5792) + AluJb SINE/Alu 1 300 (12) 34 769 19.7 0.0 0.0 sequence 14588 14714 (5286) C AluJb SINE/Alu (10) 302 176 35 1006 25.7 20.0 1.8 sequence 15520 16187 (3813) C L2 LINE/L2 (36) 3277 2475 36 1259 16.5 14.1 0.0 sequence 16192 16439 (3561) C L1MCa LINE/L1 (6125) 301 19 38 1461 19.1 5.0 0.7 sequence 16512 16793 (3207) C AluJo SINE/Alu (18) 294 1 39 1628 15.4 5.0 0.3 sequence 16985 17396 (2604) + MLT1D LTR/MaLR 1 459 (46) 40 1077 21.9 14.4 3.8 sequence 19054 19450 (550) C L1MC4 LINE/L1 (0) 8042 7604 42 893 17.5 8.1 13.0 sequence 19526 19810 (190) C MLT1E2 LTR/MaLR (186) 440 170 43 859 11.4 0.0 10.1 sequence 19850 19998 (2) C AluSg/x SINE/Alu (17) 293 160 44